5DQW date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ADP, NI enzyme
Gene BIS30
Primary referenceStructural and biochemical characterization of bacterial YpgQ protein reveals a metal-dependent nucleotide pyrophosphohydrolase., Jeon YJ, Park SC, Song WS, Kim OH, Oh BC, Yoon SI, J Struct Biol. 2016 Apr 7. pii: S1047-8477(16)30061-2. doi:, 10.1016/j.jsb.2016.04.002. PMID:27062940
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (127 Kb) [Save to disk]
  • Biological Unit Coordinates (5dqw.pdb1.gz) 119 Kb
  • LPC: Ligand-Protein Contacts for 5DQW
  • CSU: Contacts of Structural Units for 5DQW
  • Structure Factors (331 Kb)
  • Retrieve 5DQW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DQW from S2C, [Save to disk]
  • Re-refined 5dqw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5DQW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dqw] [5dqw_A] [5dqw_B]
  • SWISS-PROT database:
  • Domain found in 5DQW: [HDc ] by SMART

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science