5DT1		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BMA, NAG, TYS	enzyme
Primary reference	A new member of the V1V2-directed CAP256-VRC26 lineage that shows increased breadth and exceptional potency., Doria-Rose NA, Bhiman JN, Roark RS, Schramm CA, Gorman J, Chuang GY, Pancera M, Cale EM, Ernandes MJ, Louder MK, Asokan M, Bailer RT, Druz A, Fraschilla IR, Garrett NJ, Jarosinski M, Lynch RM, McKee K, O'Dell S, Pegu A, Schmidt SD, Staupe RP, Sutton MS, Wang K, Wibmer CK, Haynes BF, Abdool-Karim S, Shapiro L, Kwong PD, Moore PL, Morris L, Mascola JR, J Virol. 2015 Oct 14. pii: JVI.01791-15. PMID:26468542

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (221 Kb) [Save to disk] Biological Unit Coordinates (5dt1.pdb1.gz) 215 Kb LPC: Ligand-Protein Contacts for 5DT1 CSU: Contacts of Structural Units for 5DT1 Structure Factors (576 Kb) Retrieve 5DT1 in mmCIF format [Save to disk] Re-refined 5dt1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5DT1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5dt1] [5dt1_H] [5dt1_L] SWISS-PROT database: Domains found in 5DT1: [IG_like] [IGv ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---