5DZ2 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 212, MG enzyme
Primary referenceStructural Studies of Geosmin Synthase, a Bifunctional Sesquiterpene Synthase with alphaalpha Domain Architecture That Catalyzes a Unique Cyclization-Fragmentation Reaction Sequence., Harris GG, Lombardi PM, Pemberton TA, Matsui T, Weiss TM, Cole KE, Koksal M, Murphy FV 4th, Vedula LS, Chou WK, Cane DE, Christianson DW, Biochemistry. 2015 Dec 8;54(48):7142-7155. Epub 2015 Nov 24. PMID:26598179
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk]
  • Biological Unit Coordinates (5dz2.pdb1.gz) 54 Kb
  • Biological Unit Coordinates (5dz2.pdb2.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 5DZ2
  • CSU: Contacts of Structural Units for 5DZ2
  • Structure Factors (688 Kb)
  • Retrieve 5DZ2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DZ2 from S2C, [Save to disk]
  • Re-refined 5dz2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5DZ2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dz2] [5dz2_A] [5dz2_B]
  • SWISS-PROT database:

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