5E08 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceSpecific Recognition of a Single-Stranded RNA Sequence by a Synthetic Antibody Fragment., Shao Y, Huang H, Qin D, Li NS, Koide A, Staley JP, Koide S, Kossiakoff AA, Piccirilli JA, J Mol Biol. 2016 Sep 2. pii: S0022-2836(16)30349-7. doi:, 10.1016/j.jmb.2016.08.029. PMID:27593161
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk]
  • Biological Unit Coordinates (5e08.pdb1.gz) 75 Kb
  • CSU: Contacts of Structural Units for 5E08
  • Structure Factors (173 Kb)
  • Retrieve 5E08 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5E08 from S2C, [Save to disk]
  • Re-refined 5e08 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5E08 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5e08] [5e08_H] [5e08_L] [5e08_N]
  • SWISS-PROT database:
  • Domains found in 5E08: [IG_like] [IGv ] by SMART

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