5E54 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MG enzyme
Primary referenceStructures of riboswitch RNA reaction states by mix-and-inject XFEL serial crystallography., Stagno JR, Liu Y, Bhandari YR, Conrad CE, Panja S, Swain M, Fan L, Nelson G, Li C, Wendel DR, White TA, Coe JD, Wiedorn MO, Knoska J, Oberthuer D, Tuckey RA, Yu P, Dyba M, Tarasov SG, Weierstall U, Grant TD, Schwieters CD, Zhang J, Ferre-D'Amare AR, Fromme P, Draper DE, Liang M, Hunter MS, Boutet S, Tan K, Zuo X, Ji X, Barty A, Zatsepin NA, Chapman HN, Spence JC, Woodson SA, Wang YX, Nature. 2016 Nov 14. doi: 10.1038/nature20599. PMID:27841871
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (120 Kb) [Save to disk]
  • Biological Unit Coordinates (5e54.pdb1.gz) 57 Kb
  • Biological Unit Coordinates (5e54.pdb2.gz) 60 Kb
  • LPC: Ligand-Protein Contacts for 5E54
  • CSU: Contacts of Structural Units for 5E54
  • Structure Factors (391 Kb)
  • Retrieve 5E54 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5E54 from S2C, [Save to disk]
  • Re-refined 5e54 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5E54 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5e54] [5e54_A] [5e54_B]
  • SWISS-PROT database:

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