5E6M date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GAP, GTP, NI, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal Structure of the Wild-Type Human GlyRS Bound with tRNAGly in a Productive Conformation., Qin X, Deng X, Chen L, Xie W, J Mol Biol. 2016 May 31. pii: S0022-2836(16)30187-5. doi:, 10.1016/j.jmb.2016.05.018. PMID:27261259
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (232 Kb) [Save to disk]
  • Biological Unit Coordinates (5e6m.pdb1.gz) 223 Kb
  • LPC: Ligand-Protein Contacts for 5E6M
  • CSU: Contacts of Structural Units for 5E6M
  • Structure Factors (887 Kb)
  • Retrieve 5E6M in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5E6M from S2C, [Save to disk]
  • Re-refined 5e6m structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5E6M in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5e6m] [5e6m_A] [5e6m_B] [5e6m_C] [5e6m_E]
  • SWISS-PROT database:
  • Domain found in 5E6M: [WHEP-TRS ] by SMART

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