5EA7 Cell Invasion Inhibitor date Oct 15, 2015
title Crystal Structure Of Inhibitor Bms-433771 In Complex With Pr Rsv F Glycoprotein
authors M.B.Battles, J.S.Mclellan, E.Arnoult, D.Roymans, J.P.Langedijk
compound source
Molecule: Fusion Glycoprotein F0
Chain: F
Fragment: Rsv F Ectodomain (Unp Residues 1-513)
Synonym: Protein F
Engineered: Yes
Mutation: Yes
Organism_scientific: Human Respiratory Syncytial Virus A (S A2);
Organism_taxid: 11259
Strain: A2
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293 Freestyle
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P(Alpha)H
symmetry Space Group: P 41 3 2
R_factor 0.196 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
169.590 169.590 169.590 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.85 Å
ligand 5NO, NHE, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
F


Primary referenceMolecular mechanism of respiratory syncytial virus fusion inhibitors., Battles MB, Langedijk JP, Furmanova-Hollenstein P, Chaiwatpongsakorn S, Costello HM, Kwanten L, Vranckx L, Vink P, Jaensch S, Jonckers TH, Koul A, Arnoult E, Peeples ME, Roymans D, McLellan JS, Nat Chem Biol. 2015 Dec 7. doi: 10.1038/nchembio.1982. PMID:26641933
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (156 Kb) [Save to disk]
  • Biological Unit Coordinates (5ea7.pdb1.gz) 436 Kb
  • LPC: Ligand-Protein Contacts for 5EA7
  • CSU: Contacts of Structural Units for 5EA7
  • Structure Factors (453 Kb)
  • Retrieve 5EA7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5EA7 from S2C, [Save to disk]
  • Re-refined 5ea7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5EA7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5EA7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ea7] [5ea7_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5EA7
  • Community annotation for 5EA7 at PDBWiki (http://pdbwiki.org)

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