5EAP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5MO, CL, EDO, GOL, UNX enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure-Based Optimization of a Small Molecule Antagonist of the Interaction Between WD Repeat-Containing Protein 5 (WDR5) and Mixed-Lineage Leukemia 1 (MLL1)., Getlik M, Smil D, Zepeda-Velazquez C, Bolshan Y, Poda G, Wu H, Dong A, Kuznetsova E, Marcellus R, Senisterra G, Dombrovski L, Hajian T, Kiyota T, Schapira M, Arrowsmith CH, Brown PJ, Vedadi M, Al-Awar R, J Med Chem. 2016 Mar 24;59(6):2478-96. doi: 10.1021/acs.jmedchem.5b01630. Epub, 2016 Mar 9. PMID:26958703
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (5eap.pdb1.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 5EAP
  • CSU: Contacts of Structural Units for 5EAP
  • Structure Factors (520 Kb)
  • Retrieve 5EAP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5EAP from S2C, [Save to disk]
  • Re-refined 5eap structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5EAP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5eap] [5eap_A]
  • SWISS-PROT database:
  • Domain found in 5EAP: [WD40 ] by SMART

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