5EBI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BA enzyme
Primary referenceAtomic resolution structure of a chimeric DNA-RNA Z-type duplex in complex with Ba(2+) ions: a case of complicated multi-domain twinning., Gilski M, Drozdzal P, Kierzek R, Jaskolski M, Acta Crystallogr D Struct Biol. 2016 Feb;72(Pt 2):211-23. doi:, 10.1107/S2059798315024365. Epub 2016 Jan 22. PMID:26894669
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (5ebi.pdb1.gz) 15 Kb
  • Biological Unit Coordinates (5ebi.pdb2.gz) 15 Kb
  • Biological Unit Coordinates (5ebi.pdb3.gz) 16 Kb
  • Biological Unit Coordinates (5ebi.pdb4.gz) 15 Kb
  • LPC: Ligand-Protein Contacts for 5EBI
  • CSU: Contacts of Structural Units for 5EBI
  • Structure Factors (669 Kb)
  • Retrieve 5EBI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5EBI from S2C, [Save to disk]
  • Re-refined 5ebi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5EBI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ebi] [5ebi_A] [5ebi_B] [5ebi_C] [5ebi_D] [5ebi_E] [5ebi_F] [5ebi_G] [5ebi_H]
  • SWISS-PROT database:

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