5EDB date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5M8 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA Real-World Perspective on Molecular Design., Kuhn B, Guba W, Hert J, Banner D, Bissantz C, Ceccarelli S, Haap W, Korner M, Kuglstatter A, Lerner C, Mattei P, Neidhart W, Pinard E, Rudolph MG, Schulz-Gasch T, Woltering T, Stahl M, J Med Chem. 2016 Feb 24. PMID:26878596
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (5edb.pdb1.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 5EDB
  • CSU: Contacts of Structural Units for 5EDB
  • Structure Factors (3983 Kb)
  • Retrieve 5EDB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5EDB from S2C, [Save to disk]
  • Re-refined 5edb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5EDB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5edb] [5edb_A]
  • SWISS-PROT database:

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