5EDF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 1PE, AZI, MSE, NA, P6G enzyme
Gene LA50
Primary referenceStructural basis of the interaction between the putative adhesion-involved and iron-regulated FrpD and FrpC proteins of Neisseria meningitidis., Sviridova E, Rezacova P, Bondar A, Veverka V, Novak P, Schenk G, Svergun DI, Kuta Smatanova I, Bumba L, Sci Rep. 2017 Jan 13;7:40408. doi: 10.1038/srep40408. PMID:28084396
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk]
  • Biological Unit Coordinates (5edf.pdb1.gz) 89 Kb
  • LPC: Ligand-Protein Contacts for 5EDF
  • CSU: Contacts of Structural Units for 5EDF
  • Structure Factors (1037 Kb)
  • Retrieve 5EDF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5EDF from S2C, [Save to disk]
  • Re-refined 5edf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5EDF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5edf] [5edf_A]
  • SWISS-PROT database:

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