5EDS date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5MT, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery, Optimization, and in Vivo Evaluation of Benzimidazole Derivatives AM-8508 and AM-9635 as Potent and Selective PI3Kdelta Inhibitors., Shin Y, Suchomel J, Cardozo M, Duquette J, He X, Henne K, Hu YL, Kelly RC, McCarter J, McGee LR, Medina JC, Metz D, San Miguel T, Mohn D, Tran T, Vissinga C, Wong S, Wannberg S, Whittington DA, Whoriskey J, Yu G, Zalameda L, Zhang X, Cushing TD, J Med Chem. 2015 Dec 21. PMID:26652588
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (286 Kb) [Save to disk]
  • Biological Unit Coordinates (5eds.pdb1.gz) 279 Kb
  • LPC: Ligand-Protein Contacts for 5EDS
  • CSU: Contacts of Structural Units for 5EDS
  • Structure Factors (315 Kb)
  • Retrieve 5EDS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5EDS from S2C, [Save to disk]
  • Re-refined 5eds structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5EDS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5eds_A] [5eds]
  • SWISS-PROT database:
  • Domains found in 5EDS: [PI3K_C2] [PI3K_rbd] [PI3Ka] [PI3Kc ] by SMART

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