5EDV		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ZN	enzyme
Gene Ontology	Chain Function Process Component A, B I, C, D
Primary reference	Structure of a HOIP/E2~ubiquitin complex reveals RBR E3 ligase mechanism and regulation., Lechtenberg BC, Rajput A, Sanishvili R, Dobaczewska MK, Ware CF, Mace PD, Riedl SJ, Nature. 2016 Jan 28;529(7587):546-50. doi: 10.1038/nature16511. Epub 2016 Jan 20. PMID:26789245

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (485 Kb) [Save to disk] Biological Unit Coordinates (5edv.pdb1.gz) 206 Kb Biological Unit Coordinates (5edv.pdb2.gz) 424 Kb Biological Unit Coordinates (5edv.pdb3.gz) 222 Kb Biological Unit Coordinates (5edv.pdb4.gz) 55 Kb LPC: Ligand-Protein Contacts for 5EDV CSU: Contacts of Structural Units for 5EDV Structure Factors (1588 Kb) Retrieve 5EDV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5EDV from S2C, [Save to disk] Re-refined 5edv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5EDV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5edv] [5edv_I] [5edv_A] [5edv_B] [5edv_C] [5edv_D] [5edv_E] [5edv_F] [5edv_G] [5edv_H] SWISS-PROT database: Domains found in 5EDV: [IBR] [RING] [UBCc] [UBQ ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---