5EFJ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5OM, DAL, DPR, EDO, GOL, K, NO3, ZN enzyme
Primary referenceHistone deacetylase 6 structure and molecular basis of catalysis and inhibition., Hai Y, Christianson DW, Nat Chem Biol. 2016 Jul 25. doi: 10.1038/nchembio.2134. PMID:27454933
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (125 Kb) [Save to disk]
  • Biological Unit Coordinates (5efj.pdb1.gz) 118 Kb
  • LPC: Ligand-Protein Contacts for 5EFJ
  • CSU: Contacts of Structural Units for 5EFJ
  • Structure Factors (1119 Kb)
  • Retrieve 5EFJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5EFJ from S2C, [Save to disk]
  • Re-refined 5efj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5EFJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5efj] [5efj_D] [5efj_F]
  • SWISS-PROT database:

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science