OCA Atlas for 5EIX

5EIX

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

LFX, MG

enzyme

Gene

KPR ; SL72

Gene
Ontology

Chain	Function	Process	Component
A, G, B, J

Primary reference

Structure of a quinolone-stabilized cleavage complex of topoisomerase IV from Klebsiella pneumoniae and comparison with a related Streptococcus pneumoniae complex., Veselkov DA, Laponogov I, Pan XS, Selvarajah J, Skamrova GB, Branstrom A, Narasimhan J, Prasad JV, Fisher LM, Sanderson MR, Acta Crystallogr D Struct Biol. 2016 Apr 1;72(Pt 4):488-96. doi:, 10.1107/S2059798316001212. Epub 2016 Mar 24. PMID:27050128

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (860 Kb) [Save to disk]

Biological Unit Coordinates (5eix.pdb1.gz) 424 Kb

Biological Unit Coordinates (5eix.pdb2.gz) 422 Kb

LPC: Ligand-Protein Contacts for 5EIX

CSU: Contacts of Structural Units for 5EIX

Structure Factors (3321 Kb)

Retrieve 5EIX in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5EIX from S2C, [Save to disk]

Re-refined 5eix structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5EIX in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5eix_I] [5eix] [5eix_A] [5eix_B] [5eix_C] [5eix_D] [5eix_E] [5eix_F] [5eix_G] [5eix_H] [5eix_J] [5eix_K] [5eix_L]

SWISS-PROT database:

Domains found in 5EIX: [TOP2c] [TOP4c ] by SMART

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