5EMO	Rna Binding Protein	date	Nov 06, 2015
title	Structure Of The Star Domain Of T-Star In Complex With Auuaa
authors	C.Dominguez, M.Feracci
compound		source
Molecule: Kh Domain-Containing, Rna-Binding, Signal Transdu Associated Protein 3; Chain: A, B Fragment: Rna Binding Protein Synonym: Rna-Binding Protein T-Star,Sam68-Like Mammalian Pr Slm-2,Sam68-Like Phosphotyrosine Protein; Engineered: Yes Other_details: N-Terminus Ga Residues From Tag.		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Khdrbs3, Salp, Slm2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pleics 03
Molecule: Rna (5'-R(Papupupapapa)-3') Chain: E, F Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
symmetry	Space Group: P 1 21 1	R_factor 0.221 R_Free 0.269
crystal cell	length a length b length c angle alpha angle beta angle gamma 51.601 79.967 53.831 90.00 101.05 90.00
method	X-Ray Diffraction	resolution	3.03 Å
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural basis of RNA recognition and dimerization by the STAR proteins T-STAR and Sam68., Feracci M, Foot JN, Grellscheid SN, Danilenko M, Stehle R, Gonchar O, Kang HS, Dalgliesh C, Meyer NH, Liu Y, Lahat A, Sattler M, Eperon IC, Elliott DJ, Dominguez C, Nat Commun. 2016 Jan 13;7:10355. doi: 10.1038/ncomms10355. PMID:26758068

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk] Biological Unit Coordinates (5emo.pdb1.gz) 54 Kb CSU: Contacts of Structural Units for 5EMO Structure Factors (163 Kb) Retrieve 5EMO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5EMO from S2C, [Save to disk] Re-refined 5emo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5EMO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5EMO

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5emo_B] [5emo_E] [5emo_F] [5emo_A] [5emo] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5EMO: [KH ] by SMART

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Community annotation for 5EMO at PDBWiki (http://pdbwiki.org)

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