5EOH Transport Protein date Nov 10, 2015
title Crystal Structure Of Murine Neuroglobin At 270 Mpa Pressure
authors N.Colloc'H, E.Girard, B.Vallone, T.Prange
compound source
Molecule: Neuroglobin
Chain: A
Engineered: Yes
Mutation: Yes
 Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Ngb
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet3a
symmetry Space Group: H 3 2
R_factor 0.169 R_Free 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
87.560 87.560 113.636 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.90 Å
ligand HEM, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk]
  • Biological Unit Coordinates (5eoh.pdb1.gz) 27 Kb
  • LPC: Ligand-Protein Contacts for 5EOH
  • CSU: Contacts of Structural Units for 5EOH
  • Structure Factors (287 Kb)
  • Retrieve 5EOH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5EOH from S2C, [Save to disk]
  • Re-refined 5eoh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5EOH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5EOH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5eoh] [5eoh_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5EOH
  • Community annotation for 5EOH at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science