5ERY		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component C, A, B, D
Primary reference	Structural Views along the Mycobacterium tuberculosis MenD Reaction Pathway Illuminate Key Aspects of Thiamin Diphosphate-Dependent Enzyme Mechanisms., Jirgis EN, Bashiri G, Bulloch EM, Johnston JM, Baker EN, Structure. 2016 Jul 6;24(7):1167-77. doi: 10.1016/j.str.2016.04.018. Epub 2016, Jun 9. PMID:27291649

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (300 Kb) [Save to disk] Biological Unit Coordinates (5ery.pdb1.gz) 293 Kb CSU: Contacts of Structural Units for 5ERY Structure Factors (7183 Kb) Retrieve 5ERY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5ERY from S2C, [Save to disk] Re-refined 5ery structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5ERY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ery] [5ery_A] [5ery_B] [5ery_C] [5ery_D] SWISS-PROT database:

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