5ESC Oxidoreductase date Nov 16, 2015
title Crystal Structure Of Group A Streptococcus Hupz
authors J.Agniswamy, I.T.Weber
compound source
Molecule: Hupz
Chain: A, B, C, D
Synonym: Hypothetical Cytosolic Protein
Engineered: Yes
 Organism_scientific: Streptococcus Sp. 'Group A'
Organism_taxid: 36470
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
symmetry Space Group: P 1
R_factor 0.167 R_Free 0.208
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.823 61.181 61.347 78.59 86.76 80.07
method X-Ray Diffractionresolution 2.00 Å
Primary referenceIn vitro heme biotransformation by the HupZ enzyme from Group A streptococcus., Sachla AJ, Ouattara M, Romero E, Agniswamy J, Weber IT, Gadda G, Eichenbaum Z, Biometals. 2016 May 6. PMID:27154580
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk]
  • Biological Unit Coordinates (5esc.pdb1.gz) 42 Kb
  • Biological Unit Coordinates (5esc.pdb2.gz) 43 Kb
  • CSU: Contacts of Structural Units for 5ESC
  • Structure Factors (314 Kb)
  • Retrieve 5ESC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5ESC from S2C, [Save to disk]
  • Re-refined 5esc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5ESC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5ESC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5esc_B] [5esc] [5esc_A] [5esc_C] [5esc_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5ESC
  • Community annotation for 5ESC at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science