5EUU Transport Protein date Nov 19, 2015
title Rat Prestin Stas Domain In Complex With Chloride
authors G.Lolli, E.Pasqualetto, E.Costanzi, G.Bonetto, R.Battistutta
compound source
Molecule: Prestin,Prestin
Chain: A
Fragment: Stas Domain,Stas Domain,Stas Domain,Stas Domain
Synonym: Solute Carrier Family 26 Member 5,Solute Carrier F Member 5;
Engineered: Yes
Mutation: Yes
Other_details: Residues 564-636 (Variable Loop) Are Deleted Are Inserted Between Position 563 And 637
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116
Gene: Slc26a5, Pres
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet Sumo
symmetry Space Group: P 31 2 1
R_factor 0.157 R_Free 0.196
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.133 62.133 66.587 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.87 Å
ligand CL, EDO, PG4, PGE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe STAS domain of mammalian SLC26A5 prestin harbors an anion-binding site., Lolli G, Pasqualetto E, Costanzi E, Bonetto G, Battistutta R, Biochem J. 2015 Dec 3. pii: BJ20151089. PMID:26635354
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk]
  • Biological Unit Coordinates (5euu.pdb1.gz) 66 Kb
  • LPC: Ligand-Protein Contacts for 5EUU
  • CSU: Contacts of Structural Units for 5EUU
  • Structure Factors (812 Kb)
  • Retrieve 5EUU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5EUU from S2C, [Save to disk]
  • Re-refined 5euu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5EUU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5EUU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5euu_A] [5euu]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5EUU
  • Community annotation for 5EUU at PDBWiki (http://pdbwiki.org)

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