5F3B date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, D


Primary referenceBeyond CDR-grafting: Structure-guided humanization of framework and CDR regions of an anti-myostatin antibody., Apgar JR, Mader M, Agostinelli R, Benard S, Bialek P, Johnson M, Gao Y, Krebs M, Owens J, Parris K, St Andre M, Svenson K, Morris C, Tchistiakova L, MAbs. 2016 Oct;8(7):1302-1318. Epub 2016 Sep 13. PMID:27625211
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (194 Kb) [Save to disk]
  • Biological Unit Coordinates (5f3b.pdb1.gz) 189 Kb
  • LPC: Ligand-Protein Contacts for 5F3B
  • CSU: Contacts of Structural Units for 5F3B
  • Structure Factors (2914 Kb)
  • Retrieve 5F3B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5F3B from S2C, [Save to disk]
  • Re-refined 5f3b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5F3B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5f3b_F] [5f3b_D] [5f3b] [5f3b_A] [5f3b_B] [5f3b_C] [5f3b_E]
  • SWISS-PROT database:
  • Domains found in 5F3B: [IG_like] [IGv] [TGFB ] by SMART

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