OCA Atlas for 5F3H

5F3H

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
J, I, K, L

Primary reference

Beyond CDR-grafting: Structure-guided humanization of framework and CDR regions of an anti-myostatin antibody., Apgar JR, Mader M, Agostinelli R, Benard S, Bialek P, Johnson M, Gao Y, Krebs M, Owens J, Parris K, St Andre M, Svenson K, Morris C, Tchistiakova L, MAbs. 2016 Oct;8(7):1302-1318. Epub 2016 Sep 13. PMID:27625211

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (322 Kb) [Save to disk]

Biological Unit Coordinates (5f3h.pdb1.gz) 162 Kb

Biological Unit Coordinates (5f3h.pdb2.gz) 161 Kb

CSU: Contacts of Structural Units for 5F3H

Structure Factors (1105 Kb)

Retrieve 5F3H in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5F3H from S2C, [Save to disk]

Re-refined 5f3h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5F3H in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5f3h_I] [5f3h] [5f3h_A] [5f3h_B] [5f3h_C] [5f3h_D] [5f3h_E] [5f3h_F] [5f3h_G] [5f3h_H] [5f3h_J] [5f3h_K] [5f3h_L]

SWISS-PROT database:

Domains found in 5F3H: [IG_like] [IGv] [TGFB ] by SMART

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