5F6D date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5VJ enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • SUMO conjugating enzyme acti...


  • Primary referenceInsights Into the Allosteric Inhibition of the SUMO E2 Enzyme Ubc9., Hewitt WM, Lountos GT, Zlotkowski K, Dahlhauser SD, Saunders LB, Needle D, Tropea JE, Zhan C, Wei G, Ma B, Nussinov R, Waugh DS, Schneekloth JS Jr, Angew Chem Int Ed Engl. 2016 May 4;55(19):5703-7. doi: 10.1002/anie.201511351., Epub 2016 Apr 1. PMID:27038327
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk]
  • Biological Unit Coordinates (5f6d.pdb1.gz) 33 Kb
  • LPC: Ligand-Protein Contacts for 5F6D
  • CSU: Contacts of Structural Units for 5F6D
  • Structure Factors (452 Kb)
  • Retrieve 5F6D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5F6D from S2C, [Save to disk]
  • Re-refined 5f6d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5F6D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5f6d] [5f6d_A]
  • SWISS-PROT database:
  • Domain found in 5F6D: [UBCc ] by SMART

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