5F94 Transferase Transferase Inhibitor date Dec 09, 2015
title Crystal Structure Of Gsk3b In Complex With Compound 15: 2- [(Cyclopropylcarbonyl)Amino]-N-(4-Methoxypyridin-3-Yl)Pyrid Carboxamide
authors H.A.Lewis, K.Kish, G.Luo, G.M.Dubowchick
compound source
Molecule: Glycogen Synthase Kinase-3 Beta
Chain: A, B
Synonym: Gsk-3 Beta,Serinethreonine-Protein Kinase Gsk3b
Ec: 2.7.11.26,2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gsk3b
Expression_system: Unidentified Baculovirus
Expression_system_taxid: 10469
symmetry Space Group: P 21 21 21
R_factor 0.189 R_Free 0.226
crystal
cell
length a length b length c angle alpha angle beta angle gamma
83.000 82.910 177.348 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.51 Å
ligand 3UO enzyme Transferase E.C.2.7.11.26 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDiscovery of Isonicotinamides as Highly Selective, Brain Penetrable, and Orally Active Glycogen Synthase Kinase-3 Inhibitors., Luo G, Chen L, Burton CR, Xiao H, Sivaprakasam P, Krause CM, Cao Y, Liu N, Lippy J, Clarke WJ, Snow K, Raybon J, Arora V, Pokross M, Kish K, Lewis HA, Langley DR, Macor JE, Dubowchik GM, J Med Chem. 2016 Jan 22. PMID:26751161
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (229 Kb) [Save to disk]
  • Biological Unit Coordinates (5f94.pdb1.gz) 113 Kb
  • Biological Unit Coordinates (5f94.pdb2.gz) 113 Kb
  • LPC: Ligand-Protein Contacts for 5F94
  • CSU: Contacts of Structural Units for 5F94
  • Structure Factors (872 Kb)
  • Retrieve 5F94 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5F94 from S2C, [Save to disk]
  • Re-refined 5f94 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5F94 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5F94
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5f94 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5f94_B] [5f94_A] [5f94]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5F94: [S_TKc ] by SMART
  • Other resources with information on 5F94
  • Community annotation for 5F94 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science