5FCN Microtubule-Binding Protein date Dec 15, 2015
title Microtubule Binding Domain Of Human Cep135
authors S.H.W.Kraatz
compound source
Molecule: Centrosomal Protein Of 135 Kda
Chain: B, A
Fragment: Unp Residues 82-144
Synonym: Cep135,Centrosomal Protein 4
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cep135, Cep4, Kiaa0635
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pstcm1
symmetry Space Group: I 41 2 2
R_factor 0.216 R_Free 0.238
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.850 78.850 95.920 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe Human Centriolar Protein CEP135 Contains a Two-Stranded Coiled-Coil Domain Critical for Microtubule Binding., Kraatz S, Guichard P, Obbineni JM, Olieric N, Hatzopoulos GN, Hilbert M, Sen I, Missimer J, Gonczy P, Steinmetz MO, Structure. 2016 Jul 20. pii: S0969-2126(16)30138-1. doi:, 10.1016/j.str.2016.06.011. PMID:27477386
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (5fcn.pdb1.gz) 39 Kb
  • CSU: Contacts of Structural Units for 5FCN
  • Structure Factors (244 Kb)
  • Retrieve 5FCN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5FCN from S2C, [Save to disk]
  • Re-refined 5fcn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5FCN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5FCN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5fcn_B] [5fcn_A] [5fcn]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5FCN
  • Community annotation for 5FCN at PDBWiki (http://pdbwiki.org)

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