5FHH Hydrolase date Dec 22, 2015
title Structure Of Human Pif1 Helicase Domain Residues 200-641
authors X.Zhou, W.Ren, S.R.Bharath, H.Song
compound source
Molecule: Atp-Dependent Dna Helicase Pif1
Chain: A, B
Fragment: Unp Residues 200-641
Synonym: Dna Repair And Recombination Helicase Pif1
Ec: 3.6.4.12
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pif1, C15orf20
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 32 2 1
R_factor 0.310 R_Free 0.355
crystal
cell
length a length b length c angle alpha angle beta angle gamma
204.750 204.750 77.791 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.60 Å
ligand ADP, ALF enzyme Hydrolase E.C.3.6.4.12 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (233 Kb) [Save to disk]
  • Biological Unit Coordinates (5fhh.pdb1.gz) 116 Kb
  • Biological Unit Coordinates (5fhh.pdb2.gz) 109 Kb
  • LPC: Ligand-Protein Contacts for 5FHH
  • CSU: Contacts of Structural Units for 5FHH
  • Structure Factors (423 Kb)
  • Retrieve 5FHH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5FHH from S2C, [Save to disk]
  • Re-refined 5fhh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5FHH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5FHH
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5fhh from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5fhh_B] [5fhh_A] [5fhh]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5FHH
  • Community annotation for 5FHH at PDBWiki (http://pdbwiki.org)

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