5FLM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MG, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


C


D


E


F


G


H


I


J


K


L


Primary referenceStructure of transcribing mammalian RNA polymerase II., Bernecky C, Herzog F, Baumeister W, Plitzko JM, Cramer P, Nature. 2016 Jan 28;529(7587):551-4. doi: 10.1038/nature16482. Epub 2016 Jan 20. PMID:26789250
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (609 Kb) [Save to disk]
  • Biological Unit Coordinates (5flm.pdb1.gz) 599 Kb
  • LPC: Ligand-Protein Contacts for 5FLM
  • CSU: Contacts of Structural Units for 5FLM
  • Retrieve 5FLM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5FLM from S2C, [Save to disk]
    • View 5FLM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5flm] [5flm_A] [5flm_B] [5flm_C] [5flm_D] [5flm_E] [5flm_F] [5flm_G] [5flm_H] [5flm_I] [5flm_J] [5flm_K] [5flm_L] [5flm_N] [5flm_P] [5flm_T]
  • SWISS-PROT database:
  • Domains found in 5FLM: [RNA_pol_Rpb6] [RPOL4c] [RPOL8c] [RPOL9] [RPOLA_N] [RPOLCX] [RPOLD] [S1] [ZnF_C2C2 ] by SMART

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science