5FNA date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, G, D


Primary referenceMolecular basis of caspase-1 polymerization and its inhibition by a new capping mechanism., Lu A, Li Y, Schmidt FI, Yin Q, Chen S, Fu TM, Tong AB, Ploegh HL, Mao Y, Wu H, Nat Struct Mol Biol. 2016 May;23(5):416-25. doi: 10.1038/nsmb.3199. Epub 2016 Apr, 4. PMID:27043298
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk]
  • Biological Unit Coordinates (5fna.pdb1.gz) 101 Kb
  • CSU: Contacts of Structural Units for 5FNA
  • Retrieve 5FNA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5FNA from S2C, [Save to disk]
  • View 5FNA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5fna] [5fna_A] [5fna_B] [5fna_C] [5fna_D] [5fna_E] [5fna_F] [5fna_G] [5fna_H]
  • SWISS-PROT database:
  • Domain found in 5FNA: [CARD ] by SMART

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