5FPX date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NI enzyme
Primary referenceKdgF, the missing link in the microbial metabolism of uronate sugars from pectin and alginate., Hobbs JK, Lee SM, Robb M, Hof F, Barr C, Abe KT, Hehemann JH, McLean R, Abbott DW, Boraston AB, Proc Natl Acad Sci U S A. 2016 May 16. pii: 201524214. PMID:27185956
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (5fpx.pdb1.gz) 41 Kb
  • LPC: Ligand-Protein Contacts for 5FPX
  • CSU: Contacts of Structural Units for 5FPX
  • Structure Factors (502 Kb)
  • Retrieve 5FPX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5FPX from S2C, [Save to disk]
  • Re-refined 5fpx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5FPX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5fpx] [5fpx_A] [5fpx_B] [5fpx_E] [5fpx_F]
  • SWISS-PROT database:

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