5FW5	Hydrolase	date	Feb 12, 2016
title	Crystal Structure Of Human G3bp1 In Complex With Semliki For Nsp3-25 Comprising Two Fgdf Motives
authors	T.Schulte, L.Liu, M.D.Panas, B.Thaa, B.Goette, A.Achour, G.M.Mcine
compound		source
Molecule: Ras Gtpase-Activating Protein-Binding Protein 1 Chain: A, B Fragment: Ntf2-Like, Residues 1-139 Synonym: G3bp-1, Atp-Dependent Dna Helicase Viii, Hdh Viii, Domain-Binding Protein 1, G3bp1; Ec: 3.6.4.12, 3.6.4.13 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21
Molecule: Non-Structural Protein 3 Chain: C Fragment: Residues 449-473 Engineered: Yes		Organism_scientific: Semliki Forest Virus Organism_taxid: 11033 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21
symmetry	Space Group: P 41 21 2	R_factor 0.167 R_Free 0.202
crystal cell	length a length b length c angle alpha angle beta angle gamma 94.975 94.975 107.593 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.92 Å
ligand	ACT, GOL, K, SO4	enzyme	Hydrolase E.C.3.6.4.12 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Combined structural, biochemical and cellular evidence demonstrates that both FGDF motifs in alphavirus nsP3 are required for efficient replication., Schulte T, Liu L, Panas MD, Thaa B, Dickson N, Gotte B, Achour A, McInerney GM, Open Biol. 2016 Jul;6(7). pii: 160078. doi: 10.1098/rsob.160078. PMID:27383630

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (157 Kb) [Save to disk] Biological Unit Coordinates (5fw5.pdb1.gz) 299 Kb LPC: Ligand-Protein Contacts for 5FW5 CSU: Contacts of Structural Units for 5FW5 Structure Factors (703 Kb) Retrieve 5FW5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5FW5 from S2C, [Save to disk] Re-refined 5fw5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5FW5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5FW5

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5fw5_A] [5fw5] [5fw5_B] [5fw5_C] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5FW5

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