5FWC Structural Protein date Feb 12, 2016
title Human Spectrin Sh3 Domain D48g, E7a, K60a
authors P.Gallego, S.Navarro, S.Ventura, D.Reverter
compound source
Molecule: Spectrin Alpha Chain, Non-Erythrocytic 1
Chain: A
Fragment: Sh3, Residues 965-1022
Synonym: Alpha-II Spectrin, Fodrin Alpha Chain, Spectrin, N Erythroid Alpha Subunit, Human Spectrin Sh3;
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.214 R_Free 0.238
crystal
cell
length a length b length c angle alpha angle beta angle gamma
33.685 42.212 48.963 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.40 Å
ligand EDO, NH4 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (16 Kb) [Save to disk]
  • Biological Unit Coordinates (5fwc.pdb1.gz) 11 Kb
  • LPC: Ligand-Protein Contacts for 5FWC
  • CSU: Contacts of Structural Units for 5FWC
  • Structure Factors (246 Kb)
  • Retrieve 5FWC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5FWC from S2C, [Save to disk]
  • Re-refined 5fwc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5FWC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5FWC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5fwc] [5fwc_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5FWC
  • Community annotation for 5FWC at PDBWiki (http://pdbwiki.org)

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