OCA Atlas for 5FXY

5FXY

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
E, A, G, C

Primary reference

The structure of the core NuRD repression complex provides insights into its interaction with chromatin., Millard CJ, Varma N, Saleh A, Morris K, Watson PJ, Bottrill AR, Fairall L, Smith CJ, Schwabe JW, Elife. 2016 Apr 21;5. pii: e13941. doi: 10.7554/eLife.13941. PMID:27098840

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (289 Kb) [Save to disk]

Biological Unit Coordinates (5fxy.pdb1.gz) 74 Kb

Biological Unit Coordinates (5fxy.pdb2.gz) 74 Kb

Biological Unit Coordinates (5fxy.pdb3.gz) 74 Kb

Biological Unit Coordinates (5fxy.pdb4.gz) 74 Kb

CSU: Contacts of Structural Units for 5FXY

Structure Factors (1969 Kb)

Retrieve 5FXY in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5FXY from S2C, [Save to disk]

Re-refined 5fxy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5FXY in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5fxy] [5fxy_A] [5fxy_B] [5fxy_C] [5fxy_D] [5fxy_E] [5fxy_F] [5fxy_G] [5fxy_H]

SWISS-PROT database:

Domain found in 5FXY: [WD40 ] by SMART

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