5GHP	Hydrolase	date	Jun 20, 2016
title	Crystal Structure Of Human Mth1(G2kd120a Mutant) In Complex Oxo-Datp
authors	T.Nakamura, S.Waz, K.Hirata, Y.Nakabeppu, Y.Yamagata
compound		source
Molecule: 7,8-Dihydro-8-Oxoguanine Triphosphatase Chain: A, B Fragment: Unp Residues 42-197 Synonym: Mutt Homologue-1,2-Hydroxy-Datp Diphosphatase,8-Ox Nucleoside Diphosphate-Linked Moiety X Motif 1,Nudix Motif Ec: 3.6.1.55,3.6.1.56 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Nudt1, Mth1 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet8c
symmetry	Space Group: P 21 21 21	R_factor 0.147 R_Free 0.179
crystal cell	length a length b length c angle alpha angle beta angle gamma 46.233 47.237 123.195 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.19 Å
ligand	NA	enzyme	Hydrolase E.C.3.6.1.55 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystallization and preliminary X-ray analysis of human MTH1 with a homogeneous N-terminus., Koga Y, Inazato M, Nakamura T, Hashikawa C, Chirifu M, Michi A, Yamashita T, Toma S, Kuniyasu A, Ikemizu S, Nakabeppu Y, Yamagata Y, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Jan 1;69(Pt 1):45-8. doi: , 10.1107/S1744309112048002. Epub 2012 Dec 20. PMID:23295485

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (133 Kb) [Save to disk] Biological Unit Coordinates (5ghp.pdb1.gz) 66 Kb Biological Unit Coordinates (5ghp.pdb2.gz) 64 Kb LPC: Ligand-Protein Contacts for 5GHP CSU: Contacts of Structural Units for 5GHP Structure Factors (1755 Kb) Retrieve 5GHP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5GHP from S2C, [Save to disk] Re-refined 5ghp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

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Sequence-derived information

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