5GOG date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand DAL, DAR, DAS, DGL, DGN, DHI, DIL, DLE, DLY, DNE, DPN, DPR, DSG, DSN, DTH, DTY, DVA enzyme
Primary referenceMonomer/Oligomer Quasi-Racemic Protein Crystallography., Gao S, Pan M, Zheng Y, Huang Y, Zheng Q, Sun D, Lu L, Tan X, Tan X, Lan H, Wang J, Wang T, Wang J, Liu L, J Am Chem Soc. 2016 Oct 21. PMID:27768314
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (5gog.pdb1.gz) 44 Kb
  • Biological Unit Coordinates (5gog.pdb2.gz) 22 Kb
  • LPC: Ligand-Protein Contacts for 5GOG
  • CSU: Contacts of Structural Units for 5GOG
  • Structure Factors (128 Kb)
  • Retrieve 5GOG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GOG from S2C, [Save to disk]
  • Re-refined 5gog structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5GOG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5gog] [5gog_A] [5gog_B]
  • SWISS-PROT database:
  • Domain found in 5GOG: [UBQ ] by SMART

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