5GPY	Transcription	date	Aug 05, 2016
title	Crystal Structure Of The Human Tfiie Complex
authors	T.Obita, K.Miwa, R.Kojima, Y.Ohkuma, Y.Tamura, M.Mizuguchi
compound		source
Molecule: General Transcription Factor Iie Subunit 1 Chain: A Fragment: Unp Residues 1-217 Synonym: General Transcription Factor Iie 56 Kda Subunit, Transcription Initiation Factor Iie Subunit Alpha,Tfiie-Alp Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Gtf2e1, Tf2e1 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Transcription Initiation Factor Iie Subunit Beta Chain: B Fragment: Unp Residues 141-244 Synonym: Tfiie-Beta,General Transcription Factor Iie Subuni Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Gtf2e2, Tf2e2 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.199 R_Free 0.237
crystal cell	length a length b length c angle alpha angle beta angle gamma 51.520 69.200 116.530 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	ZN	enzyme
Gene Ontology	Chain Function Process Component A B
Primary reference	Crystal Structure of Human General Transcription Factor TFIIE at Atomic Resolution., Miwa K, Kojima R, Obita T, Ohkuma Y, Tamura Y, Mizuguchi M, J Mol Biol. 2016 Oct 23;428(21):4258-4266. doi: 10.1016/j.jmb.2016.09.008. Epub, 2016 Sep 15. PMID:27639436

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk] Biological Unit Coordinates (5gpy.pdb1.gz) 97 Kb LPC: Ligand-Protein Contacts for 5GPY CSU: Contacts of Structural Units for 5GPY Structure Factors (1616 Kb) Retrieve 5GPY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5GPY from S2C, [Save to disk] Re-refined 5gpy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5GPY in 3D

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Visual 3D analysis of 5GPY

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5gpy] [5gpy_B] [5gpy_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5GPY: [TFIIE ] by SMART

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