5GSD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GOL	enzyme
Gene Ontology	Chain Function Process Component B cellular response to iron io...
Primary reference	Dual non-contiguous peptide occupancy of HLA class I evoke antiviral human CD8 T cell response and form neo-epitopes with self-antigens., Xiao Z, Ye Z, Tadwal VS, Shen M, Ren EC, Sci Rep. 2017 Jul 11;7(1):5072. doi: 10.1038/s41598-017-05171-w. PMID:28698575

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (74 Kb) [Save to disk] Biological Unit Coordinates (5gsd.pdb1.gz) 69 Kb LPC: Ligand-Protein Contacts for 5GSD CSU: Contacts of Structural Units for 5GSD Structure Factors (413 Kb) Retrieve 5GSD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5GSD from S2C, [Save to disk]

View 5GSD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5gsd_A] [5gsd_B] [5gsd_C] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---