5GTO date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, MYR, T35 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for differential activities of enantiomeric PPARgamma agonists: Binding of S35 to the alternate site., Jang JY, Koh M, Bae H, An DR, Im HN, Kim HS, Yoon JY, Yoon HJ, Han BW, Park SB, Suh SW, Biochim Biophys Acta. 2017 Jun;1865(6):674-681. doi:, 10.1016/j.bbapap.2017.03.008. Epub 2017 Mar 22. PMID:28342850
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (5gto.pdb1.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 5GTO
  • CSU: Contacts of Structural Units for 5GTO
  • Structure Factors (400 Kb)
  • Retrieve 5GTO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GTO from S2C, [Save to disk]
  • Re-refined 5gto structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5GTO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5gto_A] [5gto_B]
  • SWISS-PROT database:

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