5GVS date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A, C, B, D


Primary referenceStructural and Functional Analysis of DDX41: a bispecific immune receptor for DNA and cyclic dinucleotide., Omura H, Oikawa D, Nakane T, Kato M, Ishii R, Ishitani R, Tokunaga F, Nureki O, Sci Rep. 2016 Oct 10;6:34756. doi: 10.1038/srep34756. PMID:27721487
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (138 Kb) [Save to disk]
  • Biological Unit Coordinates (5gvs.pdb1.gz) 37 Kb
  • Biological Unit Coordinates (5gvs.pdb2.gz) 36 Kb
  • Biological Unit Coordinates (5gvs.pdb3.gz) 34 Kb
  • Biological Unit Coordinates (5gvs.pdb4.gz) 34 Kb
  • CSU: Contacts of Structural Units for 5GVS
  • Structure Factors (906 Kb)
  • Retrieve 5GVS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GVS from S2C, [Save to disk]
  • Re-refined 5gvs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5GVS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5gvs] [5gvs_A] [5gvs_B] [5gvs_C] [5gvs_D]
  • SWISS-PROT database:
  • Domain found in 5GVS: [DEXDc ] by SMART

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