5GW9	Cytokine	date	Sep 09, 2016
title	Crystal Structure Of C163, A Backbone Circularized G-Csf
authors	T.Miyafusa, S.Honda
compound		source
Molecule: Granulocyte Colony-Stimulating Factor Chain: A, B, C, D Fragment: Unp Residues 40-202 Synonym: G-Csf,Pluripoietin Engineered: Yes Mutation: Yes Other_details: 1st Ser And 173rd Gly Are Connected With A P Bond.		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Csf3, C17orf33, Gcsf Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid
symmetry	Space Group: P 32	R_factor 0.177 R_Free 0.218
crystal cell	length a length b length c angle alpha angle beta angle gamma 60.941 60.941 178.509 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.65 Å
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Structural insights into the backbone-circularized granulocyte colony-stimulating factor containing a short connector., Miyafusa T, Shibuya R, Honda S, Biochem Biophys Res Commun. 2018 Apr 16. pii: S0006-291X(18)30808-8. doi:, 10.1016/j.bbrc.2018.04.045. PMID:29634929

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (228 Kb) [Save to disk] Biological Unit Coordinates (5gw9.pdb1.gz) 57 Kb Biological Unit Coordinates (5gw9.pdb2.gz) 56 Kb Biological Unit Coordinates (5gw9.pdb3.gz) 57 Kb Biological Unit Coordinates (5gw9.pdb4.gz) 56 Kb Biological Unit Coordinates (5gw9.pdb5.gz) 112 Kb Biological Unit Coordinates (5gw9.pdb6.gz) 111 Kb CSU: Contacts of Structural Units for 5GW9 Structure Factors (1884 Kb) Retrieve 5GW9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5GW9 from S2C, [Save to disk]

View 5GW9 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5GW9

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5gw9_A] [5gw9_B] [5gw9_C] [5gw9_D] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5GW9

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