5GXW Protein Binding date Sep 20, 2016
title Importin And Numa Complex
authors C.C.Chang, T.L.Huang, K.C.Hsia
compound source
Molecule: Importin Subunit Alpha-1
Chain: A
Fragment: Unp Residues 70-497
Synonym: Importin Alpha P1,Karyopherin Subunit Alpha-2,Pend Targeting Complex 58 Kda Subunit,Ptac58,Rag Cohort Protein Alpha;
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Kpna2, Rch1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid

Molecule: Peptide From Nuclear Mitotic Apparatus Protein 1
Chain: B
Fragment: Unp Residues 1984-2010
Synonym: Nuclear Matrix Protein-22,Nmp-22,Nuclear Mitotic A Protein,Numa Protein,Sp-H Antigen;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Numa1, Nmp22, Numa
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
symmetry Space Group: P 21 21 21
R_factor 0.183 R_Free 0.218
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.065 89.658 101.187 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.39 Å
Primary referenceRegulation of mitotic spindle assembly factor NuMA by Importin-beta., Chang CC, Huang TL, Shimamoto Y, Tsai SY, Hsia KC, J Cell Biol. 2017 Sep 22. pii: jcb.201705168. doi: 10.1083/jcb.201705168. PMID:28939615
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk]
  • Biological Unit Coordinates (5gxw.pdb1.gz) 74 Kb
  • CSU: Contacts of Structural Units for 5GXW
  • Structure Factors (718 Kb)
  • Retrieve 5GXW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GXW from S2C, [Save to disk]
  • View 5GXW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5GXW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5gxw_A] [5gxw_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5GXW
  • Community annotation for 5GXW at PDBWiki (http://pdbwiki.org)

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