5GYJ		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene	CD630
Primary reference	Structural Insights into Substrate Recognition by Clostridium difficile Sortase., Yin JC, Fei CH, Lo YC, Hsiao YY, Chang JC, Nix JC, Chang YY, Yang LW, Huang IH, Wang S, Front Cell Infect Microbiol. 2016 Nov 22;6:160. eCollection 2016. PMID:27921010

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk] Biological Unit Coordinates (5gyj.pdb1.gz) 31 Kb CSU: Contacts of Structural Units for 5GYJ Structure Factors (114 Kb) Retrieve 5GYJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5GYJ from S2C, [Save to disk] Re-refined 5gyj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5GYJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5gyj] [5gyj_A] SWISS-PROT database:

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