5H1O CRISPR-associated protein date
authors Ka, D., Jeong, U., Bae, E.
compound source
symmetry
R_factor
R_Free 0.2052
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.65
ligand ACT enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • nuclease activity
  • endonuclease activity
  • endoribonuclease activity


  • Primary referenceStructural and dynamic insights into the role of conformational switching in the nuclease activity of the Xanthomonas albilineans Cas2 in CRISPR-mediated adaptive immunity., Ka D, Hong S, Jeong U, Jeong M, Suh N, Suh JY, Bae E, Struct Dyn. 2017 May 19;4(5):054701. doi: 10.1063/1.4984052. eCollection 2017, Sep. PMID:28612041
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk]
  • Biological Unit Coordinates (5h1o.pdb1.gz) 61 Kb
  • LPC: Ligand-Protein Contacts for 5H1O
  • CSU: Contacts of Structural Units for 5H1O
  • Structure Factors (855 Kb)
  • Retrieve 5H1O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5H1O from S2C, [Save to disk]
  • View 5H1O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5H1O
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5h1o from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5h1o_B] [5h1o_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5H1O
  • Community annotation for 5H1O at PDBWiki (http://pdbwiki.org)

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