5H3V date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand IPA, PEG enzyme
Primary referenceCrystal structure of the type IV secretion system component CagX from Helicobacter pylori., Zhang J, Fan F, Zhao Y, Sun L, Liu Y, Keegan RM, Isupov MN, Wu Y, Acta Crystallogr F Struct Biol Commun. 2017 Mar 1;73(Pt 3):167-173. doi:, 10.1107/S2053230X17001376. Epub 2017 Feb 28. PMID:28291753
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk]
  • Biological Unit Coordinates (5h3v.pdb1.gz) 20 Kb
  • Biological Unit Coordinates (5h3v.pdb2.gz) 20 Kb
  • LPC: Ligand-Protein Contacts for 5H3V
  • CSU: Contacts of Structural Units for 5H3V
  • Structure Factors (596 Kb)
  • Retrieve 5H3V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5H3V from S2C, [Save to disk]
  • Re-refined 5h3v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5H3V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5h3v] [5h3v_A] [5h3v_B]
  • SWISS-PROT database:

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