5HDH		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BMA, MAN, MES, NAG, SO4	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Autoinhibition and relief mechanism by the proteolytic processing of Toll-like receptor 8., Tanji H, Ohto U, Motoi Y, Shibata T, Miyake K, Shimizu T, Proc Natl Acad Sci U S A. 2016 Mar 15;113(11):3012-7. doi:, 10.1073/pnas.1516000113. Epub 2016 Feb 29. PMID:26929371

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (136 Kb) [Save to disk] Biological Unit Coordinates (5hdh.pdb1.gz) 129 Kb LPC: Ligand-Protein Contacts for 5HDH CSU: Contacts of Structural Units for 5HDH Structure Factors (1115 Kb) Retrieve 5HDH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5HDH from S2C, [Save to disk] Re-refined 5hdh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5HDH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5hdh] [5hdh_A] SWISS-PROT database: Domains found in 5HDH: [LRR] [LRRCT] [LRR_TYP ] by SMART

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