5HFU Transferase Transferase Inhibitor date Jan 07, 2016
title Crystal Structure Of Human Hexokinase 2 With Cmpd 27, A 2-Am Benzenesulfonamide Glucosamine
authors N.Campobasso, B.Zhao, A.Smallwood
compound source
Molecule: Hexokinase-2
Chain: A, B
Synonym: Hexokinase Type II,Hk II,Muscle Form Hexokinase
Ec: 2.7.1.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hk2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.182 R_Free 0.252
crystal
cell
length a length b length c angle alpha angle beta angle gamma
65.883 154.986 114.205 90.00 95.70 90.00
method X-Ray Diffractionresolution 2.92 Å
ligand 603 enzyme Transferase E.C.2.7.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (289 Kb) [Save to disk]
  • Biological Unit Coordinates (5hfu.pdb1.gz) 144 Kb
  • Biological Unit Coordinates (5hfu.pdb2.gz) 143 Kb
  • LPC: Ligand-Protein Contacts for 5HFU
  • CSU: Contacts of Structural Units for 5HFU
  • Structure Factors (1015 Kb)
  • Retrieve 5HFU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5HFU from S2C, [Save to disk]
  • Re-refined 5hfu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5HFU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5HFU
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5hfu from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5hfu_B] [5hfu] [5hfu_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5HFU
  • Community annotation for 5HFU at PDBWiki (http://pdbwiki.org)

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