5HGV date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NAG, SO4, UDP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C


Primary referenceHow the glycosyltransferase OGT catalyzes amide bond cleavage., Janetzko J, Trauger SA, Lazarus MB, Walker S, Nat Chem Biol. 2016 Sep 12. doi: 10.1038/nchembio.2173. PMID:27618188
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (473 Kb) [Save to disk]
  • Biological Unit Coordinates (5hgv.pdb1.gz) 237 Kb
  • Biological Unit Coordinates (5hgv.pdb2.gz) 230 Kb
  • Biological Unit Coordinates (5hgv.pdb3.gz) 471 Kb
  • Biological Unit Coordinates (5hgv.pdb4.gz) 457 Kb
  • LPC: Ligand-Protein Contacts for 5HGV
  • CSU: Contacts of Structural Units for 5HGV
  • Structure Factors (1830 Kb)
  • Retrieve 5HGV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5HGV from S2C, [Save to disk]
  • Re-refined 5hgv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5HGV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5hgv] [5hgv_A] [5hgv_B] [5hgv_C] [5hgv_D]
  • SWISS-PROT database:
  • Domain found in 5HGV: [TPR ] by SMART

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