OCA Atlas for 5HL7

5HL7

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

62B, EOH, EPE, MG, MN, MPD, SPD

enzyme

Gene
Ontology

Chain	Function	Process	Component
2
3
4
A
B
C
D
E
G
H
I
J
K
L
M
N
O
P
Q
R
S
T
U
V
W
Z

Primary reference

A novel pleuromutilin antibacterial compound, its binding mode and selectivity mechanism., Eyal Z, Matzov D, Krupkin M, Paukner S, Riedl R, Rozenberg H, Zimmerman E, Bashan A, Yonath A, Sci Rep. 2016 Dec 13;6:39004. doi: 10.1038/srep39004. PMID:27958389

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (3373 Kb) [Save to disk]

Biological Unit Coordinates (5hl7.pdb1.gz) 3340 Kb

LPC: Ligand-Protein Contacts for 5HL7

CSU: Contacts of Structural Units for 5HL7

Structure Factors (3798 Kb)

Retrieve 5HL7 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5HL7 from S2C, [Save to disk]

Re-refined 5hl7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5HL7 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5hl7_I] [5hl7] [5hl7_2] [5hl7_3] [5hl7_4] [5hl7_A] [5hl7_B] [5hl7_C] [5hl7_D] [5hl7_E] [5hl7_G] [5hl7_H] [5hl7_J] [5hl7_K] [5hl7_L] [5hl7_M] [5hl7_N] [5hl7_O] [5hl7_P] [5hl7_Q] [5hl7_R] [5hl7_S] [5hl7_T] [5hl7_U] [5hl7_V] [5hl7_W] [5hl7_X] [5hl7_Y] [5hl7_Z]

SWISS-PROT database:

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