5HML date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand B3P, CL, EDO, IOD, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • nuclease activity
  • endonuclease activity
  • exonuclease activity
  • 5'-3' exonuclease activity
  • 5'-3' exodeoxyribonuclease a...


  • Primary referenceDirect observation of DNA threading in flap endonuclease complexes., AlMalki FA, Flemming CS, Zhang J, Feng M, Sedelnikova SE, Ceska T, Rafferty JB, Sayers JR, Artymiuk PJ, Nat Struct Mol Biol. 2016 Jun 6. doi: 10.1038/nsmb.3241. PMID:27273516
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (209 Kb) [Save to disk]
  • Biological Unit Coordinates (5hml.pdb1.gz) 102 Kb
  • Biological Unit Coordinates (5hml.pdb2.gz) 104 Kb
  • LPC: Ligand-Protein Contacts for 5HML
  • CSU: Contacts of Structural Units for 5HML
  • Structure Factors (6005 Kb)
  • Retrieve 5HML in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5HML from S2C, [Save to disk]
  • Re-refined 5hml structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5HML in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5hml] [5hml_A] [5hml_B]
  • SWISS-PROT database:
  • Domains found in 5HML: [53EXOc] [HhH2 ] by SMART

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