5HNS	Protein Binding	date	Jan 18, 2016
title	Structure Of Glycosylated Npc1 Luminal Domain C
authors	Y.Zhao, J.Ren, K.Harlos, D.I.Stuart
compound		source
Molecule: Niemann-Pick C1 Protein Chain: A, B Fragment: Domain C, Unp Residues 387-618 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Npc1 Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: Hek293s Expression_system_organ: Kidney
symmetry	Space Group: C 2 2 21	R_factor 0.224 R_Free 0.238
crystal cell	length a length b length c angle alpha angle beta angle gamma 87.890 115.910 147.400 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.45 Å
ligand	BMA, MAN, NAG, SCN	enzyme
Primary reference	Structure of glycosylated NPC1 luminal domain C reveals insights into NPC2 and Ebola virus interactions., Zhao Y, Ren J, Harlos K, Stuart DI, FEBS Lett. 2016 Feb 5. doi: 10.1002/1873-3468.12089. PMID:26846330

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (163 Kb) [Save to disk] Biological Unit Coordinates (5hns.pdb1.gz) 79 Kb Biological Unit Coordinates (5hns.pdb2.gz) 79 Kb LPC: Ligand-Protein Contacts for 5HNS CSU: Contacts of Structural Units for 5HNS Structure Factors (1845 Kb) Retrieve 5HNS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5HNS from S2C, [Save to disk] Re-refined 5hns structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5HNS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5HNS

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5hns] [5hns_B] [5hns_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5HNS

Community annotation for 5HNS at PDBWiki (http://pdbwiki.org)

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