5HTK Transferase, Hydrolase date Jan 27, 2016
title Human Heart 6-Phosphofructo-2-Kinasefructose-2,6-Bisphospha (Pfkfb2)
authors R.B.Crochet
compound source
Molecule: 6-Phosphofructo-2-Kinasefructose-2,6-Bisphosphat
Chain: A, B
Synonym: Pfkfbpase 2,6pf-2-Kfru-2,6-P2ase Heart-Type Isoz
Ec: 2.7.1.105,3.1.3.46
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pfkfb2
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21
Expression_system_variant: De3
symmetry Space Group: P 21 21 21
R_factor 0.149 R_Free 0.175
crystal
cell
length a length b length c angle alpha angle beta angle gamma
106.523 113.946 133.154 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.01 Å
ligand ATP, EDO, F6P, FLC, GOL, MES, MG, NEP enzyme Transferase E.C.2.7.1.105 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • 6-phosphofructo-2-kinase act...
  • fructose-2,6-bisphosphate 2-...


  • Primary referenceCrystal structure of heart 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase (PFKFB2) and the inhibitory influence of citrate on substrate binding., Crochet RB, Kim JD, Lee H, Yim YS, Kim SG, Neau D, Lee YH, Proteins. 2016 Nov 1. doi: 10.1002/prot.25204. PMID:27802586
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (445 Kb) [Save to disk]
  • Biological Unit Coordinates (5htk.pdb1.gz) 434 Kb
  • LPC: Ligand-Protein Contacts for 5HTK
  • CSU: Contacts of Structural Units for 5HTK
  • Structure Factors (6978 Kb)
  • Retrieve 5HTK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5HTK from S2C, [Save to disk]
  • Re-refined 5htk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5HTK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5HTK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5htk_A] [5htk] [5htk_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5HTK: [PGAM ] by SMART
  • Other resources with information on 5HTK
  • Community annotation for 5HTK at PDBWiki (http://pdbwiki.org)

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